In this paper we present an extended model related to reconciliation concepts. It is based on gene duplications, gene losses
and speciation events. We define an evolutionary scenario (called a DLS-tree) which informally can represent an evolution
of genes in species. We are interested in all scenarios – not only parsimonious ones. We propose a system of rules for transforming
the scenarios. We prove that the system is confluent, sound and strongly normalizing. We show that a scenario in normal form
(i.e. non-reducible) is unique and minimal in the sense of the cost computed as the total number of gene duplications and
losses. Moreover, we present a classification of the scenarios and analyze their hierarchy. Finally, we prove that the tree
in normal form could be easily transformed into the reconciled tree [12] in duplication-loss model. This solves some open
problems stated in [13].
Keywords molecular evolution - phylogenetic tree - reconciliation - gene duplication - gene loss - computational biology
Financial support is provided by KBN Grant 4 T11F 020 25.