A model for DNA implementation of Royal Road evolutionary computations is presented. An encoding for a Royal Road problem
is presented. Experimental results utilizing 2-d denaturing gradient gel electrophoresis (2-d DGGE) and polyacrylamide gel
electrophoresis (PAGE) for separation by fitness in this sample Royal Road problem are shown. Suggestions for possible use
of the MutS and MutY proteins as tools for separation by fitness are given. Plans for future experiments and implementation
are discussed.
Supported by NSF Grants No. 9805703 and No. 9980092
Partially supported by NSF Grant No. 9980092 and DARPA/NSF Grant No. 9725021.