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Abstract

Network based pathways are emerging as an important paradigm for analysis of biological systems. In the present article, we introduce a new method for identifying a set of extreme regulatory pathways by using structural equations as a tool for modeling genetic networks. The method, first of all, generates data on reaction flows in a pathway. A set of constraints is formulated incorporating weighting coefficients. The effectiveness of the present method is demonstrated on two genetic networks existing in the literature. A comparative study with the existing extreme pathway analysis also forms a part of this investigation.

Keywords  flux balance analysis - gene regulatory networks - apoptosis - incidence matrix - yeast cell cycle

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