Lrk (Lr10 receptor-like kinase) and
Tak (
Triticum aestivum kinase) belong to the receptor-like kinase (RLK) supergene family in higher plants. Three
Lrk/
Tak gene regions spanning greater than 600 kb were identified via a genome-wide survey of barley gene-rich BAC clones. Two
Lrk/
Tak gene clusters are positioned on barley chromosome 3 (3H) and another is localized on chromosome 5 (1H), with each
Lrk and
Tak open reading frame physically positioned in a back-to-back orientation. Thirteen new
Lrk/
Tak-like fragments were cloned from the two clusters on 3H and the single cluster on 1H, respectively, and compared phylogenetically
with other grass
Lrk/
Tak-like genes, including a 280-kb
Lrk/
Tak cluster on rice chromosome 1S. Physically clustered
Lrk/
Tak-like genes always form monophyletic groups; this suggests that the primary mechanism of expansion of the
Lrk/
Tak RLK super family was by tandem duplication, of which most members were duplicated after speciation of the Poaceae. Cultivar-dependent
transcript accumulation of some
Lrk/
Tak family members on 3H, as revealed via Barley1 GeneChip microarray analysis, is consistent with the hypothesis of subfunctionalization
of
Lrk/Tak members following tandem duplication.
Keywords
Lrk/Tak
- Duplication - Evolution - Gene cluster