A universal primer (Sprimer: 5
′-GGX AAY AAY AGY GGX CAZ CC-3
′, X = A, G, C or T; Y = T or C; Z = A or G), designed from the consensus sequences that code for the conserved sequence GNNSGQP
in the NIb region of members of the family
Potyviridae, was used to amplify by RT-PCR the 3′-terminal genome regions from infected plant samples representing 21 different viruses
in the family. Sequencing of some of the fragments (
c. 1.7 kb) showed that the type strain (ATTC PV-107) of
Oat necrotic mottle virus is not a distinct species in the genus
Rymovirus, but is synonymous with
Brome streak mosaic virus (genus
Tritimovirus) and that
Celery mosaic virus is a distinct member of the genus
Potyvirus not closely related to any other sequenced species. Potyviruses infecting crops in China were also investigated, showing
that viruses on cowpea and maize in Hangzhou, Zhejiang province were respectively
Bean common mosaic virus and
Sugarcane mosaic virus and that one on garlic in Nanjing, Jiangsu province was
Onion yellow dwarf virus. Fragments were also sequenced from Chinese isolates of
Lettuce mosaic virus and
Soybean mosaic virus (from Hangzhou),
Turnip mosaic virus (2 different isolates from Zhejiang province) and RNA1 of
Wheat yellow mosaic virus (from Rongcheng, Shandong province).
Received June 30, 2000 Accepted September 28, 2000