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Book Chapter
Computational Thinking in Biology
Book Series
Lecture Notes in Computer Science
Publisher
Springer Berlin / Heidelberg
ISSN
0302-9743 (Print) 1611-3349 (Online)
Volume
Volume 4780/2007
Book
Transactions on Computational Systems Biology VIII
DOI
10.1007/978-3-540-76639-1
Copyright
2007
ISBN
978-3-540-76638-4
DOI
10.1007/978-3-540-76639-1_4
Pages
63-76
Subject Collection
Computer Science
SpringerLink Date
Sunday, October 28, 2007
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Computational Thinking in Biology
Corrado Priami
1
(1)
The Microsoft Research - University of Trento, Centre for Computational and Systems Biology,
Abstract
The paper presents a new approach based on process calculi to systems modeling suitable for biological systems. The main characteristic of process calculi is a linguistic description level to define incrementally and compositionally executable models. The formalism is suitable to be exploited on the same system at different levels of abstractions connected through well defined formal rules. The abstraction principle that represents biological entities as interacting computational units is the basis of the computational thinking that can help biology to unravel the functions of the cell machinery. We discuss then the perspectives that process calculi can open to life sciences and the impact that this can in turn produce on computer science.
Corrado
Priami
Email:
priami@cosbi.eu
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