Expansins comprise a superfamily of plant cell wall-loosening proteins that has been divided into four distinct families,
EXPA, EXPB, EXLA and EXLB. In a recent analysis of
Arabidopsis thaliana and
Oryza sativa expansins, we proposed a further subdivision of the families into 17 clades, representing independent lineages in the last
common ancestor of monocots and eudicots. This division was based on both traditional sequence-based phylogenetic trees and
on position-based trees, in which genomic locations and dated segmental duplications were used to reconstruct gene phylogeny.
In this article we review recent work concerning the patterns of expansin evolution in angiosperms and include additional
insights gained from the genome of a second eudicot species,
Populus trichocarpa, which includes at least 36 expansin genes. All of the previously proposed monocot-eudicot orthologous groups, but no additional
ones, are represented in this species. The results also confirm that all of these clades are truly independent lineages. Furthermore,
we have used position-based phylogeny to clarify the history of clades EXPA-II and EXPA-IV. Most of the growth of the expansin
superfamily in the poplar lineage is likely due to a recent polyploidy event. Finally, some monocot-eudicot clades are shown
to have diverged before the separation of the angiosperm and gymnosperm lineages.
Keywords Expansin evolution - Arabidopsis - Rice -
Populus trichocarpa (Poplar) - Genome duplication - Microsynteny