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Identification of a Broad-Specificity Xylosidase/Arabinosidase Important for Xylooligosaccharide Fermentation by the Ruminal Anaerobe Selenomonas ruminantium GA192

Terence R. Whitehead1 and Michael A. Cotta1

(1)  Fermentation Biochemistry Research Unit, National Center for Agricultural Utilization Research, USDA, Agricultural Research Service,, 1815 N. University Street, Peoria, IL 61604, USA, US
Abstract  
Strains of Selenomonas ruminantium vary considerably in their capacity to ferment xylooligosaccharides. This ability ranges from strain GA192, which completely utilized xylose through xylotetraose and was able to ferment considerable quantities of larger oligosaccharides, to strain HD4, which used only the simple sugars present in the hydrolysate. The ability of S. ruminantium GA192 to utilize xylooligosaccharides was correlated with the presence of xylosidase and arabinosidase activities. The production of these activities appears to be regulated in response to carbon source used for growth. Both arabinosidase and xylosidase were induced by growth on xylose or xylooligosaccharides, but no activity was detected in glucose-or arabinose-grown cultures. A genetic locus from S. ruminantium GA192 was cloned into Escherichia coli JM83 that produced both xylosidase and arabinosidase activities. Analyses of crude extracts from the E. coli clone and S. ruminantium GA192 by using native polyacrylamide gel electrophoresis and methylumbelliferyl substrates indicated that a single protein was responsible for both activities. The enzyme expressed in E. coli was capable of degrading xylooligosaccharides derived from xylan. DNA sequencing of the locus demonstrated the presence of an open reading frame that encodes for a protein of 61,174 molecular weight.
Received: 12 January 2001 / Accepted: 5 March 2001

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Referenced by
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  1. Jordan, Douglas Brian (2010) β-d-Xylosidase from Selenomonas ruminantium: Role of Glutamate 186 in Catalysis Revealed by Site-Directed Mutagenesis, Alternate Substrates, and Active-Site Inhibitor. Applied Biochemistry and Biotechnology
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  2. Fan, Zhanmin (2009) Engineering lower inhibitor affinities in β-d-xylosidase. Applied Microbiology and Biotechnology
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  3. DODD, DYLAN (2009) Enzymatic deconstruction of xylan for biofuel production. GCB Bioenergy
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  4. Goujon, Thomas (2003) AtBXL1, a novel higher plant (Arabidopsis thaliana) putative beta-xylosidase gene, is involved in secondary cell wall metabolism and plant development. The Plant Journal 33(4)
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  5. Jordan, Douglas B. (2008) β-d-Xylosidase from Selenomonas ruminantium: Thermodynamics of Enzyme-Catalyzed and Noncatalyzed Reactions. Applied Biochemistry and Biotechnology
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  6. Fan, Zhanmin (2008) The construction and characterization of two xylan-degrading chimeric enzymes. Biotechnology and Bioengineering
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  7. Khandeparker, Rakhee (2008) Bifunctional xylanases and their potential use in biotechnology. Journal of Industrial Microbiology & Biotechnology
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  8. Jordan, Douglas B. (2007) Β-d-Xylosidase from Selenomonas ruminantium: Catalyzed Reactions with Natural and Artificial Substrates. Applied Biochemistry and Biotechnology
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  9. Jordan, Douglas B. (2007) Structure-function relationships of a catalytically efficient β-D-xylosidase. Applied Biochemistry and Biotechnology 141(1)
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  10. Jordan, Douglas B. (2007) β-d-Xylosidase from Selenomonas ruminantium of glycoside hydrolase family 43. Applied Biochemistry and Biotechnology 137-140(1)
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