We have determined the nucleotide sequences of two structural genes of the
Escherichia coli gab cluster, which encodes the enzymes of the 4-aminobutyrate degradation pathway:
gabD, coding for succinic semialdehyde dehydrogenase (SSDH, EC 1.2.1.16) and
gabP, coding for the 4-aminobutyrate (GABA) transport carrier (GABA permease). We have previously reported the nucleotide sequence of the third structural gene of the cluster,
gabT, coding for glutamate: succinic semialdehyde transaminase (EC 2.6.1.19). All three
gab genes are transribed unidirectionally and their orientation within the cluster is 5

-
gabD-gabT-gabP-3

.
gabT and
gabP are separated by an intergenic region of 234-bp, which contains three repetetive extragenic palindromic (REP) sequences. The
gabD gene consists of 1,449 nucleotides specifying a protein of 482 amino acids with a molecular mass of 51.7 kDa. The protein shows significant homologies to the NAD
+-dependent aldehyde dehydrogenase (EC 1.2.1.3) from
Aspergillus nidulans and several mammals, and to the tumor associated NADP
+-dependent aldehyde dehydrogenase (EC 1.2.1.4) from rat. The permease gene
gabP comprises 1,401 nucleotides coding a highly hydrophobic protein of 466 amino acids with a molecular mass of 51.1 kDa. The GABA permease shows features typical for an integral membrane protein and is highly homologous to the aromatic acid carrier from
E. coli, the proline, arginine and histidine permeases from
Saccharomyces cerevisiae and the proline transport protein from
A. nidulans. Uptake of GABA was increased ca. 5-fold in transformants of
E. coli containing
gabP plasmids. Strong overexpression of the
gabP gene under control of the isopropyl-2-
d-thiogalactoside (IPTG) inducible
tac promoter, however, resulted in a severe growth inhibition of the transformed strains. The GABA carrier was characterized using moderately overexpressing transformants. The
K
m of GABA uptake was found to be 11.8

M and the V
max 0.33 nmol/min · mg cells. Uptake of GABA was stimulated by ammonium sulfate and abolished by 2,4-dinitrophenol. Aspartate competed with GABA for uptake.