Protocol

Analyzing Patterns of Microbial Evolution Using the Mauve Genome Alignment System

Aaron E Darling, Todd J Treangen, Xavier Messeguer and Nicole T Perna

Methods in Molecular Biology™, 1, Volume 396, Comparative Genomics, II, Pages 135-152

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Book Chapter

Retrieval

William Hersh

Health Informatics, 2009, Information Retrieval, 2, Pages 199-233

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Book Chapter

An Overview of Genome Databases

David W. Ussery, Trudy M. Wassenaar and Stefano Borini

Computational Biology, 1, Volume 8, Computing for Comparative Microbial Genomics, Part I, Pages 53-67

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Protocol

GCG: Production of Multiple Sequence Alignment

Reinhard Dölz

Methods in Molecular Biology™, 1, Volume 24, Computer Analysis of Sequence Data, Pages 83-99

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Protocol

Public Databases
Retrieving and Manipulating Sequences for Beginners

Neil Woodford

Methods in Molecular Biology™, 1, Volume 266, Genomics, Proteomics, and Clinical Bacteriology, Part I, Pages 17-28

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Book Chapter

The Clustal Series of Programs for Multiple Sequence Alignment

Julie D. Thompson

2005, The Proteomics Protocols Handbook, Pages 493-502

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Book Chapter

Smart Sequence Similarity Search(S4) System

Zhuo Chen, Arturo Concepcion, Anthony Metcalf, Arokiya Joseph and Laurence Bohannan

Lecture Notes in Computer Science, 2007, Volume 4578, Applications of Fuzzy Sets Theory, Pages 643-650

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Book Chapter

Mining the Research Literature in Systems Biology

Keir T. Reavie

2009, Bioinformatics for Systems Biology, Part V, Pages 369-383

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