Volume 6, Number 2, 149-158, DOI: 10.1007/BF01703064

The complete nucleotide sequence of a variant of coxsackievirus A24, an agent causing acute hemorrhagic conjunctivitis

Kasama Supanaranond, Naokazu Takeda and Shudo Yamazaki

View Related Documents

Abstract

The complete nucleotide sequence was determined for the cDNAs that represent the RNA genome of the standard strain of a variant of coxsackievirus A24, the EH24/70, one of the agents causing acute hemorrhagic conjunctivitis. The genome is 7461 nucleotide long and is polyadenylated at the 3prime-end terminus. Following a 750-nucleotide 5prime-noncoding region, there was a long open reading frame of 6642 nucleotides, which serve to encode a viral polyprotein consisting of 2214 amino acids. Comparison of the deduced amino acid sequence of the polyprotein with those of known enteroviruses allowed us to predict the possible cleavage sites. The overall structure and the organization of the RNA genome is typical for an enterovirus. Based on the similarity of the nucleotide sequence of the 5prime and 3prime noncoding regions, together with the amino-acid sequence of the encoded proteins, EH24/70 appeared to be closely related to polioviruses and coxsackievirus A21.

Key words  Coxsackievirus A24 variant - nucleotide sequence of CA24v - enterovirus - acute hemorrhagic conjunctivitis

The nucleotide sequence data reported in this paper will appear in the DDBJ, EMBL, and GenBank Nucleotide Sequence Databases under the accession number D90457.

Fulltext Preview

Image of the first page of the fulltext document